Research workbench
AlphaFold monomer V2.0 prediction for tRNA URIDINE(34) hydroxylase (B5BBD3)
Analyse AlphaFold monomer V2.0 prediction for tRNA URIDINE(34) hydroxylase (B5BBD3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5BBD3
- Type
- protein
- Length
- 350 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD904A62Eecaad31A1EEd697d993525ba9E3f643b
- Molecule
- TRNA URIDINE(34) hydroxylase
- UniProt
- B5BBD3
- Pockets
- 5 · best druggability 0.71
Structure
1 distinct chain · 33% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA URIDINE(34) hydroxylase | protein | 350 | 33% helix, 20% strand | B5BBD3 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 546 | 0.71 | 0.79 | 55 | empty |
| 2 | 129 | 0.44 | 0.76 | 21 | empty |
| 3 | 65 | 0.40 | 0.80 | 16 | empty |
| 4 | 93 | 0.37 | 0.76 | 16 | empty |
| 5 | 107 | 0.36 | 0.74 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5BBD3
- Elsewhere: UniProt B5BBD3 · AlphaFold DB B5BBD3
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