Research workbench
AlphaFold monomer V2.0 prediction for malto-oligosyltrehalose trehalohydrolase (Q55088)
Analyse AlphaFold monomer V2.0 prediction for malto-oligosyltrehalose trehalohydrolase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q55088
- Type
- protein
- Length
- 559 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Malto-oligosyltrehalose trehalohydrolase
- UniProt
- Q55088
- Pockets
- 3 · best druggability 0.64
Structure
1 distinct chain · 30% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Malto-oligosyltrehalose trehalohydrolase | protein | 559 | 30% helix, 23% strand | Q55088 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 472 | 0.64 | 0.77 | 50 | empty |
| 2 | 115 | 0.50 | 0.81 | 16 | empty |
| 3 | 60 | 0.31 | 0.75 | 15 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 1EH9 · Crystal structure of sulfolobus solfataricus glycosyltrehalose trehalohydrolase · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1EH9 · Crystal structure of sulfolobus solfataricus glycosyltrehalose trehalohydrolase · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3VGF · Crystal structure of glycosyltrehalose trehalohydrolase (D252S) complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3VGF · Crystal structure of glycosyltrehalose trehalohydrolase (D252S) complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1EHA · Crystal structure of glycosyltrehalose trehalohydrolase from sulfolobus solfataricus · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1EHA · Crystal structure of glycosyltrehalose trehalohydrolase from sulfolobus solfataricus · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3VGE · Crystal structure of glycosyltrehalose trehalohydrolase (D252S) · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3VGE · Crystal structure of glycosyltrehalose trehalohydrolase (D252S) · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3VGH · Crystal structure of glycosyltrehalose trehalohydrolase (E283Q) complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3VGH · Crystal structure of glycosyltrehalose trehalohydrolase (E283Q) complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3VGG · Crystal structure of glycosyltrehalose trehalohydrolase (E283Q) complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3VGG · Crystal structure of glycosyltrehalose trehalohydrolase (E283Q) complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q55088
- Elsewhere: UniProt Q55088 · AlphaFold DB Q55088
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