Research workbench
AlphaFold monomer V2.0 prediction for periplasmic trehalase (A9MVX4)
Analyse AlphaFold monomer V2.0 prediction for periplasmic trehalase (A9MVX4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9MVX4
- Type
- protein
- Length
- 570 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xE2FAAD9Bd269b0F591a298c8d3F4EEcE83134D70
- Molecule
- Periplasmic trehalase
- UniProt
- A9MVX4
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 45% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic trehalase | protein | 570 | 45% helix, 8% strand | A9MVX4 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 71 | 0.74 | 0.98 | 24 | empty |
| 2 | 309 | 0.56 | 0.76 | 38 | empty |
| 3 | 120 | 0.39 | 0.74 | 23 | empty |
| 4 | 97 | 0.35 | 0.74 | 16 | empty |
| 5 | 76 | 0.33 | 0.74 | 15 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9MVX4
- Elsewhere: UniProt A9MVX4 · AlphaFold DB A9MVX4
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