Research workbench
AlphaFold monomer V2.0 prediction for periplasmic trehalase (Q5PI73)
Analyse AlphaFold monomer V2.0 prediction for periplasmic trehalase (Q5PI73) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5PI73
- Type
- protein
- Length
- 570 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7fD0d808d9DD0f826A6CBD6764A5B55C527677a5
- Molecule
- Periplasmic trehalase
- UniProt
- Q5PI73
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 46% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic trehalase | protein | 570 | 46% helix, 8% strand | Q5PI73 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 75 | 0.76 | 0.99 | 25 | empty |
| 2 | 316 | 0.56 | 0.76 | 39 | empty |
| 3 | 81 | 0.39 | 0.77 | 20 | empty |
| 4 | 72 | 0.32 | 0.74 | 16 | empty |
| 5 | 51 | 0.28 | 0.75 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5PI73
- Elsewhere: UniProt Q5PI73 · AlphaFold DB Q5PI73
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