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AlphaFold monomer V2.0 prediction for T cell receptor alpha chain MC.7.G5 (P0DTU3)

Analyse AlphaFold monomer V2.0 prediction for T cell receptor alpha chain MC.7.G5… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P0DTU3
Type: protein
Length: 275 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
Molecule: T cell receptor alpha chain MC.7.G5
UniProt: P0DTU3
Pockets: 2 · best druggability 0.31

Structure

1 distinct chain · 16% helix, 33% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	T cell receptor alpha chain MC.7.G5	protein	275	16% helix, 33% strand	P0DTU3

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	70	0.31	0.74	15	empty
2	59	0.30	0.75	15	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

8RLU · TCR in complex with HLA-E*01:03 bound to HBV envelope 371-379 S3N peptide · an experimental structure of the same protein · chain A against D, TM-score 0.63
8RLT · TCR in complex with HLA-E*01:03 bound to HBV envelope 371-379 index peptide · an experimental structure of the same protein · chain A against D, TM-score 0.61

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0DTU3
Elsewhere: UniProt P0DTU3 · AlphaFold DB P0DTU3

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