Research workbench
AlphaFold monomer V2.0 prediction for conjugal transfer protein trag (Q00185)
Analyse AlphaFold monomer V2.0 prediction for conjugal transfer protein trag (Q00185) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q00185
- Type
- protein
- Length
- 635 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Conjugal transfer protein trag
- UniProt
- Q00185
- Pockets
- 5 · best druggability 0.60
Structure
1 distinct chain · 43% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Conjugal transfer protein trag | protein | 635 | 43% helix, 15% strand | Q00185 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 197 | 0.60 | 0.82 | 33 | empty |
| 2 | 67 | 0.40 | 0.79 | 16 | empty |
| 3 | 85 | 0.34 | 0.75 | 16 | empty |
| 4 | 61 | 0.30 | 0.75 | 17 | empty |
| 5 | 50 | 0.26 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00185
- Elsewhere: UniProt Q00185 · AlphaFold DB Q00185
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