Research workbench
AlphaFold monomer V2.0 prediction for conjugal transfer protein traa (Q44363)
Analyse AlphaFold monomer V2.0 prediction for conjugal transfer protein traa (Q44363) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q44363
- Type
- protein
- Length
- 1,100 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80bC91a39541Aaa3f52Ab1232B5c129d2134d7ee
- Molecule
- Conjugal transfer protein traa
- UniProt
- Q44363
- Pockets
- 10 · best druggability 0.78
Structure
1 distinct chain · 51% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Conjugal transfer protein traa | protein | 1100 | 51% helix, 16% strand | Q44363 |
Pockets
10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1114 | 0.78 | 0.80 | 104 | empty |
| 2 | 1054 | 0.75 | 0.78 | 74 | empty |
| 3 | 202 | 0.72 | 0.88 | 21 | empty |
| 4 | 606 | 0.69 | 0.77 | 57 | empty |
| 5 | 467 | 0.59 | 0.74 | 52 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q44363
- Elsewhere: UniProt Q44363 · AlphaFold DB Q44363
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