Research workbench
AlphaFold monomer V2.0 prediction for (-)-germacrene D synthase (Q6Q3H3)
Analyse AlphaFold monomer V2.0 prediction for (-)-germacrene D synthase (Q6Q3H3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6Q3H3
- Type
- protein
- Length
- 557 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x682b1Ade9797D7737EF045Ba7770A53e5CF3c3Bc
- Molecule
- (-)-germacrene D synthase
- UniProt
- Q6Q3H3
- Pockets
- 10 · best druggability 0.84
Structure
1 distinct chain · 69% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | (-)-germacrene D synthase | protein | 557 | 69% helix, 0% strand | Q6Q3H3 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 202 | 0.84 | 0.97 | 35 | empty |
| 2 | 581 | 0.80 | 0.85 | 70 | empty |
| 3 | 226 | 0.51 | 0.76 | 21 | empty |
| 4 | 55 | 0.44 | 0.84 | 13 | empty |
| 5 | 65 | 0.43 | 0.82 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6Q3H3
- Elsewhere: UniProt Q6Q3H3 · AlphaFold DB Q6Q3H3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.