Research workbench
AlphaFold monomer V2.0 prediction for bifunctional levopimaradiene synthase, chloroplastic (Q50EK2)
Analyse AlphaFold monomer V2.0 prediction for bifunctional levopimaradiene synthase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q50EK2
- Type
- protein
- Length
- 850 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Bifunctional levopimaradiene synthase, chloroplastic
- UniProt
- Q50EK2
- Pockets
- 13 · best druggability 0.83
Structure
1 distinct chain · 61% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bifunctional levopimaradiene synthase, chloroplastic | protein | 850 | 61% helix, 3% strand | Q50EK2 |
Pockets
13 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 375 | 0.83 | 0.91 | 51 | empty |
| 2 | 482 | 0.81 | 0.88 | 66 | empty |
| 3 | 524 | 0.80 | 0.87 | 49 | empty |
| 4 | 143 | 0.53 | 0.81 | 25 | empty |
| 5 | 171 | 0.53 | 0.79 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q50EK2
- Elsewhere: UniProt Q50EK2 · AlphaFold DB Q50EK2
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