Research workbench
AlphaFold monomer V2.0 prediction for copalyl diphosphate synthase 1 (J9QS23)
Analyse AlphaFold monomer V2.0 prediction for copalyl diphosphate synthase 1 (J9QS23) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- J9QS23
- Type
- protein
- Length
- 739 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Copalyl diphosphate synthase 1
- UniProt
- J9QS23
- Pockets
- 8 · best druggability 0.80
Structure
1 distinct chain · 65% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Copalyl diphosphate synthase 1 | protein | 739 | 65% helix, 2% strand | J9QS23 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 489 | 0.80 | 0.87 | 50 | empty |
| 2 | 698 | 0.78 | 0.83 | 49 | empty |
| 3 | 403 | 0.67 | 0.80 | 40 | empty |
| 4 | 350 | 0.62 | 0.78 | 42 | empty |
| 5 | 93 | 0.40 | 0.77 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J9QS23
- Elsewhere: UniProt J9QS23 · AlphaFold DB J9QS23
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