Research workbench
AlphaFold monomer V2.0 prediction for germacrene-a synthase (I6QSN0)
Analyse AlphaFold monomer V2.0 prediction for germacrene-a synthase (I6QSN0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- I6QSN0
- Type
- protein
- Length
- 563 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Germacrene-a synthase
- UniProt
- I6QSN0
- Pockets
- 7 · best druggability 0.81
Structure
1 distinct chain · 71% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Germacrene-a synthase | protein | 563 | 71% helix, 0% strand | I6QSN0 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 392 | 0.81 | 0.90 | 50 | empty |
| 2 | 247 | 0.80 | 0.93 | 39 | empty |
| 3 | 220 | 0.54 | 0.77 | 23 | empty |
| 4 | 73 | 0.48 | 0.83 | 16 | empty |
| 5 | 79 | 0.37 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I6QSN0
- Elsewhere: UniProt I6QSN0 · AlphaFold DB I6QSN0
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