Research workbench
AlphaFold monomer V2.0 prediction for terpenoid synthase 18 (Q9LUE2)
Analyse AlphaFold monomer V2.0 prediction for terpenoid synthase 18 (Q9LUE2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9LUE2
- Type
- protein
- Length
- 605 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80E4770D64c852Ea54fa095e4246B7F0d7647117
- Molecule
- Terpenoid synthase 18
- UniProt
- Q9LUE2
- Pockets
- 8 · best druggability 0.86
Structure
1 distinct chain · 66% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Terpenoid synthase 18 | protein | 605 | 66% helix, 0% strand | Q9LUE2 |
Pockets
8 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 473 | 0.86 | 0.93 | 49 | empty |
| 2 | 219 | 0.64 | 0.83 | 40 | empty |
| 3 | 428 | 0.60 | 0.75 | 37 | empty |
| 4 | 342 | 0.59 | 0.77 | 36 | empty |
| 5 | 70 | 0.59 | 0.89 | 22 | empty |
Compared structures
- 7BZC · Crystal structure of plant sesterterpene synthase ATTPS18 complexed with farnesyl… · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 7BZC · Crystal structure of plant sesterterpene synthase AtTPS18 complexed with farnesyl… · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 7BZB · Crystal structure of plant sesterterpene synthase ATTPS18 · an experimental structure of the same protein · chain A against A, TM-score 0.86
- 7BZB · Crystal structure of plant sesterterpene synthase AtTPS18 · an experimental structure of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LUE2
- Elsewhere: UniProt Q9LUE2 · AlphaFold DB Q9LUE2
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