Research workbench
AlphaFold monomer V2.0 prediction for outer membrane protein TPN50 (P38369)
Analyse AlphaFold monomer V2.0 prediction for outer membrane protein TPN50 (P38369) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P38369
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Outer membrane protein TPN50
- UniProt
- P38369
- Pockets
- 6 · best druggability 0.83
Structure
1 distinct chain · 15% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane protein TPN50 | protein | 417 | 15% helix, 43% strand | P38369 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 727 | 0.83 | 0.86 | 57 | empty |
| 2 | 132 | 0.49 | 0.79 | 26 | empty |
| 3 | 93 | 0.42 | 0.79 | 21 | empty |
| 4 | 61 | 0.39 | 0.80 | 15 | empty |
| 5 | 112 | 0.37 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38369
- Elsewhere: UniProt P38369 · AlphaFold DB P38369
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