Research workbench
AlphaFold monomer V2.0 prediction for triosephosphate isomerase (P00942)
Analyse AlphaFold monomer V2.0 prediction for triosephosphate isomerase (P00942) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P00942
- Type
- protein
- Length
- 248 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA65332f6cc3AFf3C663bE680E6edCA7908A06064
- Molecule
- Triosephosphate isomerase
- UniProt
- P00942
- Pockets
- 2 · best druggability 0.37
Structure
1 distinct chain · 44% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Triosephosphate isomerase | protein | 248 | 44% helix, 16% strand | P00942 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 79 | 0.37 | 0.77 | 15 | empty |
| 2 | 50 | 0.25 | 0.74 | 18 | empty |
Compared structures
- 1NEY · Triosephosphate Isomerase in Complex with DHAP · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1NEY · Triosephosphate isomerase in complex with dhap · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 7TIM · Structure of the triosephosphate isomerase-phosphoglycolohydroxamate complex: an analogue… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 7TIM · Structure of the triosephosphate isomerase- phosphoglycolohydroxamate complex: an… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4FF7 · Structure of C126S mutant of saccharomyces cerevisiae triosephosphate isomerase · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 4FF7 · Structure of C126S mutant of Saccharomyces cerevisiae triosephosphate isomerase · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3YPI · Electrophilic catalysis in triosephosphase isomerase: the role of histidine-95 · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3YPI · Electrophilic catalysis in triosephosphase isomerase: the role of histidine-95 · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2YPI · Crystallographic analysis of the complex between triosephosphate isomerase and… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2YPI · Crystallographic analysis of the complex between triosephosphate isomerase and… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 1I45 · Yeast triosephosphate isomerase (mutant) · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00942
- Elsewhere: UniProt P00942 · AlphaFold DB P00942
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