Research workbench
AlphaFold monomer V2.0 prediction for trimethylamine-N-oxide reductase (P44798)
Analyse AlphaFold monomer V2.0 prediction for trimethylamine-N-oxide reductase (P44798) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P44798
- Type
- protein
- Length
- 825 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x362a6d063b1B7E1B6EfD3A9A7CA3612e3FE037AA
- Molecule
- Trimethylamine-N-oxide reductase
- UniProt
- P44798
- Pockets
- 8 · best druggability 0.84
Structure
1 distinct chain · 32% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trimethylamine-N-oxide reductase | protein | 825 | 32% helix, 17% strand | P44798 |
Pockets
8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 229 | 0.84 | 0.97 | 37 | empty |
| 2 | 452 | 0.76 | 0.85 | 57 | empty |
| 3 | 82 | 0.72 | 0.96 | 16 | empty |
| 4 | 183 | 0.57 | 0.81 | 26 | empty |
| 5 | 232 | 0.52 | 0.76 | 34 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P44798
- Elsewhere: UniProt P44798 · AlphaFold DB P44798
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