Research workbench
AlphaFold monomer V2.0 prediction for trimethylamine-N-oxide reductase 2 (P46923)
Analyse AlphaFold monomer V2.0 prediction for trimethylamine-N-oxide reductase 2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P46923
- Type
- protein
- Length
- 809 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2358fDf347F514B5e6fFcFa89F8c28fA3A0E58EF
- Molecule
- Trimethylamine-N-oxide reductase 2
- UniProt
- P46923
- Pockets
- 6 · best druggability 0.83
Structure
1 distinct chain · 31% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trimethylamine-N-oxide reductase 2 | protein | 809 | 31% helix, 18% strand | P46923 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 249 | 0.83 | 0.95 | 43 | empty |
| 2 | 433 | 0.77 | 0.85 | 55 | empty |
| 3 | 163 | 0.49 | 0.77 | 26 | empty |
| 4 | 219 | 0.46 | 0.73 | 25 | empty |
| 5 | 174 | 0.45 | 0.75 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P46923
- Elsewhere: UniProt P46923 · AlphaFold DB P46923
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