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AlphaFold monomer V2.0 prediction for torcad operon transcriptional regulatory protein torr (P38684)

Analyse AlphaFold monomer V2.0 prediction for torcad operon transcriptional regulatory… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P38684
Type: protein
Length: 230 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
Molecule: Torcad operon transcriptional regulatory protein torr
UniProt: P38684
Pockets: 4 · best druggability 0.74

Structure

1 distinct chain · 43% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Torcad operon transcriptional regulatory protein torr	protein	230	43% helix, 22% strand	P38684

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	265	0.74	0.88	40	empty
2	137	0.47	0.77	21	empty
3	117	0.39	0.75	18	empty
4	50	0.25	0.73	13	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

1ZGZ · Crystal Structure Of The Receiver Domain Of TMAO Respiratory System Response Regulator… · an experimental structure of the same protein · chain A against A, TM-score 0.51
1ZGZ · Crystal structure of the receiver domain of tmao respiratory system response regulator… · an experimental structure of the same protein · chain A against A, TM-score 0.51

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P38684
Elsewhere: UniProt P38684 · AlphaFold DB P38684

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