Research workbench
AlphaFold monomer V2.0 prediction for protein TOPAZ1 (Q8N9V7)
Analyse AlphaFold monomer V2.0 prediction for protein TOPAZ1 (Q8N9V7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8N9V7
- Type
- protein
- Length
- 1,692 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBb37fE2B3777b9cf6A94E8e4EF413FcB6B83A32E
- Molecule
- Protein TOPAZ1
- UniProt
- Q8N9V7
- Pockets
- 8 · best druggability 0.57
Structure
1 distinct chain · 23% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein TOPAZ1 | protein | 1692 | 23% helix, 1% strand | Q8N9V7 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 175 | 0.57 | 0.81 | 34 | empty |
| 2 | 252 | 0.55 | 0.77 | 25 | empty |
| 3 | 361 | 0.53 | 0.73 | 36 | empty |
| 4 | 72 | 0.48 | 0.83 | 17 | empty |
| 5 | 123 | 0.40 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8N9V7
- Elsewhere: UniProt Q8N9V7 · AlphaFold DB Q8N9V7
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