Research workbench
AlphaFold monomer V2.0 prediction for topoisomerase 1-associated factor 1 (Q6CFJ2)
Analyse AlphaFold monomer V2.0 prediction for topoisomerase 1-associated factor 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6CFJ2
- Type
- protein
- Length
- 1,054 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Topoisomerase 1-associated factor 1
- UniProt
- Q6CFJ2
- Pockets
- 9 · best druggability 0.74
Structure
1 distinct chain · 52% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Topoisomerase 1-associated factor 1 | protein | 1054 | 52% helix, 4% strand | Q6CFJ2 |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1110 | 0.74 | 0.77 | 95 | empty |
| 2 | 203 | 0.47 | 0.75 | 25 | empty |
| 3 | 71 | 0.45 | 0.81 | 19 | empty |
| 4 | 111 | 0.39 | 0.75 | 19 | empty |
| 5 | 59 | 0.35 | 0.78 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6CFJ2
- Elsewhere: UniProt Q6CFJ2 · AlphaFold DB Q6CFJ2
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