Research workbench
AlphaFold monomer V2.0 prediction for putative transposon gamma-delta 80.3 kda protein (Q00042)
Analyse AlphaFold monomer V2.0 prediction for putative transposon gamma-delta 80.3 kda… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q00042
- Type
- protein
- Length
- 698 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- Putative transposon gamma-delta 80.3 kda protein
- UniProt
- Q00042
- Pockets
- 8 · best druggability 0.75
Structure
1 distinct chain · 55% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transposon gamma-delta 80.3 kda protein | protein | 698 | 55% helix, 11% strand | Q00042 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 659 | 0.75 | 0.81 | 76 | empty |
| 2 | 238 | 0.72 | 0.87 | 35 | empty |
| 3 | 117 | 0.45 | 0.78 | 19 | empty |
| 4 | 56 | 0.40 | 0.81 | 11 | empty |
| 5 | 68 | 0.34 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00042
- Elsewhere: UniProt Q00042 · AlphaFold DB Q00042
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