Research workbench
AlphaFold monomer V2.0 prediction for transposase for transposon TN1546 (Q06238)
Analyse AlphaFold monomer V2.0 prediction for transposase for transposon TN1546 (Q06238) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q06238
- Type
- protein
- Length
- 988 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7782F4817b37743d738e9aF842bf74bd50f2015E
- Molecule
- Transposase for transposon TN1546
- UniProt
- Q06238
- Pockets
- 9 · best druggability 0.79
Structure
1 distinct chain · 62% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transposase for transposon TN1546 | protein | 988 | 62% helix, 7% strand | Q06238 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1017 | 0.79 | 0.81 | 72 | empty |
| 2 | 314 | 0.68 | 0.83 | 39 | empty |
| 3 | 379 | 0.58 | 0.75 | 43 | empty |
| 4 | 143 | 0.49 | 0.78 | 23 | empty |
| 5 | 158 | 0.47 | 0.77 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06238
- Elsewhere: UniProt Q06238 · AlphaFold DB Q06238
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