Research workbench
AlphaFold monomer V2.0 prediction for transmembrane protease serine 5 (Q9H3S3)
Analyse AlphaFold monomer V2.0 prediction for transmembrane protease serine 5 (Q9H3S3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9H3S3
- Type
- protein
- Length
- 457 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Transmembrane protease serine 5
- UniProt
- Q9H3S3
- Pockets
- 6 · best druggability 0.57
Structure
1 distinct chain · 18% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transmembrane protease serine 5 | protein | 457 | 18% helix, 28% strand | Q9H3S3 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 266 | 0.57 | 0.77 | 28 | empty |
| 2 | 220 | 0.55 | 0.78 | 29 | empty |
| 3 | 96 | 0.47 | 0.81 | 20 | empty |
| 4 | 82 | 0.44 | 0.81 | 23 | empty |
| 5 | 105 | 0.36 | 0.74 | 17 | empty |
Modifications
Observed in the structure: 8 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H3S3
- Elsewhere: UniProt Q9H3S3 · AlphaFold DB Q9H3S3
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