Research workbench
AlphaFold monomer V2.0 prediction for transmembrane protein 8B (B1AWJ5)
Analyse AlphaFold monomer V2.0 prediction for transmembrane protein 8B (B1AWJ5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1AWJ5
- Type
- protein
- Length
- 472 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Transmembrane protein 8B
- UniProt
- B1AWJ5
- Pockets
- 3 · best druggability 0.71
Structure
1 distinct chain · 38% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transmembrane protein 8B | protein | 472 | 38% helix, 22% strand | B1AWJ5 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 709 | 0.71 | 0.78 | 83 | empty |
| 2 | 141 | 0.52 | 0.80 | 17 | empty |
| 3 | 150 | 0.42 | 0.74 | 20 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1AWJ5
- Elsewhere: UniProt B1AWJ5 · AlphaFold DB B1AWJ5
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