Research workbench
AlphaFold monomer V2.0 prediction for TRNA(MET) cytidine acetate ligase (B9DPU4)
Analyse AlphaFold monomer V2.0 prediction for TRNA(MET) cytidine acetate ligase (B9DPU4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B9DPU4
- Type
- protein
- Length
- 382 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- TRNA(MET) cytidine acetate ligase
- UniProt
- B9DPU4
- Pockets
- 4 · best druggability 0.79
Structure
1 distinct chain · 51% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA(MET) cytidine acetate ligase | protein | 382 | 51% helix, 12% strand | B9DPU4 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 680 | 0.79 | 0.83 | 67 | empty |
| 2 | 87 | 0.52 | 0.84 | 22 | empty |
| 3 | 169 | 0.47 | 0.76 | 20 | empty |
| 4 | 146 | 0.41 | 0.74 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B9DPU4
- Elsewhere: UniProt B9DPU4 · AlphaFold DB B9DPU4
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