Research workbench
AlphaFold monomer V2.0 prediction for transmembrane protein 87B (Q96K49)
Analyse AlphaFold monomer V2.0 prediction for transmembrane protein 87B (Q96K49) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q96K49
- Type
- protein
- Length
- 555 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2B6383898c41F2462737128e3CAF97Eebe0482a0
- Molecule
- Transmembrane protein 87B
- UniProt
- Q96K49
- Pockets
- 4 · best druggability 0.84
Structure
1 distinct chain · 48% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transmembrane protein 87B | protein | 555 | 48% helix, 14% strand | Q96K49 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1040 | 0.84 | 0.84 | 66 | empty |
| 2 | 541 | 0.67 | 0.78 | 57 | empty |
| 3 | 148 | 0.53 | 0.80 | 19 | empty |
| 4 | 141 | 0.42 | 0.75 | 23 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96K49
- Elsewhere: UniProt Q96K49 · AlphaFold DB Q96K49
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