Research workbench
AlphaFold monomer V2.0 prediction for transmembrane protein 87A (Q28EW0)
Analyse AlphaFold monomer V2.0 prediction for transmembrane protein 87A (Q28EW0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q28EW0
- Type
- protein
- Length
- 541 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- Transmembrane protein 87A
- UniProt
- Q28EW0
- Pockets
- 8 · best druggability 0.85
Structure
1 distinct chain · 48% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transmembrane protein 87A | protein | 541 | 48% helix, 13% strand | Q28EW0 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 981 | 0.85 | 0.85 | 76 | empty |
| 2 | 688 | 0.71 | 0.78 | 48 | empty |
| 3 | 158 | 0.54 | 0.80 | 19 | empty |
| 4 | 78 | 0.48 | 0.82 | 17 | empty |
| 5 | 110 | 0.41 | 0.76 | 23 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q28EW0
- Elsewhere: UniProt Q28EW0 · AlphaFold DB Q28EW0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.