Research workbench
AlphaFold monomer V2.0 prediction for transmembrane protein 87A (Q8BXN9)
Analyse AlphaFold monomer V2.0 prediction for transmembrane protein 87A (Q8BXN9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8BXN9
- Type
- protein
- Length
- 555 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xCeCD2814d417eBBa0C46f29c45070f45487A6BBB
- Molecule
- Transmembrane protein 87A
- UniProt
- Q8BXN9
- Pockets
- 6 · best druggability 0.86
Structure
1 distinct chain · 53% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transmembrane protein 87A | protein | 555 | 53% helix, 13% strand | Q8BXN9 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1137 | 0.86 | 0.86 | 101 | empty |
| 2 | 363 | 0.57 | 0.75 | 38 | empty |
| 3 | 116 | 0.56 | 0.83 | 19 | empty |
| 4 | 134 | 0.51 | 0.79 | 24 | empty |
| 5 | 90 | 0.38 | 0.76 | 15 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BXN9
- Elsewhere: UniProt Q8BXN9 · AlphaFold DB Q8BXN9
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