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AlphaFold monomer V2.0 prediction for transmembrane protein 184 homolog YKR051W (P36142)

Analyse AlphaFold monomer V2.0 prediction for transmembrane protein 184 homolog YKR051W… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P36142
Type: protein
Length: 418 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xf4ED13986579E8e227b3ED6c02276c648754EC27
Molecule: Transmembrane protein 184 homolog YKR051W
UniProt: P36142
Pockets: 6 · best druggability 0.70

Structure

1 distinct chain · 70% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transmembrane protein 184 homolog YKR051W	protein	418	70% helix, 3% strand	P36142

Pockets

6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	643	0.70	0.78	43	empty
2	61	0.48	0.83	12	empty
3	150	0.47	0.77	24	empty
4	101	0.40	0.76	14	empty
5	54	0.40	0.81	14	empty

Compared structures

6AAG · Crystal structure of budding yeast Atg8 complexed with the helical AIM of Hfl1. · an experimental structure of the same protein · chain A against B, TM-score 0.15
6AAG · Crystal structure of budding yeast ATG8 complexed with the helical aim of HFL1. · an experimental structure of the same protein · chain A against B, TM-score 0.15

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P36142
Elsewhere: UniProt P36142 · AlphaFold DB P36142

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