Research workbench
AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (A5F623)
Analyse AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (A5F623) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5F623
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x50B22156fFFa386E37890a984C292bcba4d97D5e
- Molecule
- TRNA(ILE)-lysidine synthase
- UniProt
- A5F623
- Pockets
- 5 · best druggability 0.79
Structure
1 distinct chain · 43% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA(ILE)-lysidine synthase | protein | 440 | 43% helix, 20% strand | A5F623 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 883 | 0.79 | 0.82 | 64 | empty |
| 2 | 144 | 0.45 | 0.76 | 22 | empty |
| 3 | 116 | 0.42 | 0.76 | 22 | empty |
| 4 | 71 | 0.33 | 0.76 | 15 | empty |
| 5 | 65 | 0.31 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5F623
- Elsewhere: UniProt A5F623 · AlphaFold DB A5F623
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