Research workbench
AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (C1CN76)
Analyse AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (C1CN76) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C1CN76
- Type
- protein
- Length
- 425 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- TRNA(ILE)-lysidine synthase
- UniProt
- C1CN76
- Pockets
- 5 · best druggability 0.80
Structure
1 distinct chain · 40% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA(ILE)-lysidine synthase | protein | 425 | 40% helix, 23% strand | C1CN76 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1189 | 0.80 | 0.81 | 81 | empty |
| 2 | 114 | 0.49 | 0.80 | 18 | empty |
| 3 | 58 | 0.34 | 0.78 | 14 | empty |
| 4 | 53 | 0.29 | 0.75 | 10 | empty |
| 5 | 50 | 0.27 | 0.75 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C1CN76
- Elsewhere: UniProt C1CN76 · AlphaFold DB C1CN76
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