Research workbench
AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (Q5M217)
Analyse AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (Q5M217) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5M217
- Type
- protein
- Length
- 421 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- TRNA(ILE)-lysidine synthase
- UniProt
- Q5M217
- Pockets
- 4 · best druggability 0.79
Structure
1 distinct chain · 39% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA(ILE)-lysidine synthase | protein | 421 | 39% helix, 23% strand | Q5M217 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 818 | 0.79 | 0.82 | 55 | empty |
| 2 | 114 | 0.41 | 0.76 | 15 | empty |
| 3 | 74 | 0.39 | 0.78 | 15 | empty |
| 4 | 58 | 0.26 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5M217
- Elsewhere: UniProt Q5M217 · AlphaFold DB Q5M217
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