Research workbench
AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (Q0C5V2)
Analyse AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (Q0C5V2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0C5V2
- Type
- protein
- Length
- 367 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc80b46AF78867fEDD81548116F7a1b91a9b8EA03
- Molecule
- TRNA(ILE)-lysidine synthase
- UniProt
- Q0C5V2
- Pockets
- 3 · best druggability 0.84
Structure
1 distinct chain · 50% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA(ILE)-lysidine synthase | protein | 367 | 50% helix, 14% strand | Q0C5V2 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1092 | 0.84 | 0.85 | 81 | empty |
| 2 | 251 | 0.56 | 0.77 | 35 | empty |
| 3 | 241 | 0.52 | 0.76 | 32 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0C5V2
- Elsewhere: UniProt Q0C5V2 · AlphaFold DB Q0C5V2
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