Research workbench
AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (C5BYK3)
Analyse AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (C5BYK3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5BYK3
- Type
- protein
- Length
- 330 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- TRNA(ILE)-lysidine synthase
- UniProt
- C5BYK3
- Pockets
- 3 · best druggability 0.80
Structure
1 distinct chain · 53% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA(ILE)-lysidine synthase | protein | 330 | 53% helix, 12% strand | C5BYK3 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 672 | 0.80 | 0.84 | 47 | empty |
| 2 | 153 | 0.42 | 0.74 | 20 | empty |
| 3 | 74 | 0.31 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5BYK3
- Elsewhere: UniProt C5BYK3 · AlphaFold DB C5BYK3
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