Research workbench
AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (Q5WAE0)
Analyse AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (Q5WAE0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5WAE0
- Type
- protein
- Length
- 469 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- TRNA(ILE)-lysidine synthase
- UniProt
- Q5WAE0
- Pockets
- 5 · best druggability 0.77
Structure
1 distinct chain · 42% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA(ILE)-lysidine synthase | protein | 469 | 42% helix, 23% strand | Q5WAE0 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1010 | 0.77 | 0.79 | 68 | empty |
| 2 | 250 | 0.50 | 0.75 | 32 | empty |
| 3 | 92 | 0.46 | 0.80 | 18 | empty |
| 4 | 64 | 0.32 | 0.76 | 12 | empty |
| 5 | 65 | 0.30 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5WAE0
- Elsewhere: UniProt Q5WAE0 · AlphaFold DB Q5WAE0
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