Research workbench
AlphaFold monomer V2.0 prediction for thrombospondin type-1 domain- containing protein 1 (Q9JM61)
Analyse AlphaFold monomer V2.0 prediction for thrombospondin type-1 domain- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9JM61
- Type
- protein
- Length
- 851 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7F33a9F770353bFf70F3E1B35e2FD71C13f0da54
- Molecule
- Thrombospondin type-1 domain-containing protein 1
- UniProt
- Q9JM61
- Pockets
- 4 · best druggability 0.49
Structure
1 distinct chain · 9% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thrombospondin type-1 domain-containing protein 1 | protein | 851 | 9% helix, 22% strand | Q9JM61 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.49 | 0.82 | 19 | empty |
| 2 | 79 | 0.43 | 0.80 | 24 | empty |
| 3 | 146 | 0.40 | 0.74 | 21 | empty |
| 4 | 51 | 0.37 | 0.80 | 17 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JM61
- Elsewhere: UniProt Q9JM61 · AlphaFold DB Q9JM61
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