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AlphaFold monomer V2.0 prediction for thrombospondin type-1 domain- containing protein 7B (Q9C0I4)
Analyse AlphaFold monomer V2.0 prediction for thrombospondin type-1 domain- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9C0I4
- Type
- protein
- Length
- 1,606 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x769C4e9A7b7784AD5199be775C9699987ab81150
- Molecule
- Thrombospondin type-1 domain-containing protein 7B
- UniProt
- Q9C0I4
- Pockets
- 13 · best druggability 0.69
Structure
1 distinct chain · 8% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thrombospondin type-1 domain-containing protein 7B | protein | 1606 | 8% helix, 34% strand | Q9C0I4 |
Pockets
13 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 865 | 0.69 | 0.75 | 89 | empty |
| 2 | 355 | 0.63 | 0.79 | 34 | empty |
| 3 | 475 | 0.62 | 0.76 | 51 | empty |
| 4 | 510 | 0.62 | 0.75 | 49 | empty |
| 5 | 379 | 0.54 | 0.73 | 37 | empty |
Modifications
Observed in the structure: 65 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9C0I4
- Elsewhere: UniProt Q9C0I4 · AlphaFold DB Q9C0I4
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