Research workbench
AlphaFold monomer V2.0 prediction for RNA 2',3'-cyclic phosphodiesterase (Q8U4Q3)
Analyse AlphaFold monomer V2.0 prediction for RNA 2',3'-cyclic phosphodiesterase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8U4Q3
- Type
- protein
- Length
- 184 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6dECDC1502b13A35f39b76D366097B55a271cEF0
- Molecule
- RNA 2',3'-cyclic phosphodiesterase
- UniProt
- Q8U4Q3
- Pockets
- 1 · best druggability 0.56
Structure
1 distinct chain · 32% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA 2',3'-cyclic phosphodiesterase | protein | 184 | 32% helix, 45% strand | Q8U4Q3 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 288 | 0.56 | 0.76 | 34 | empty |
Compared structures
- 2FYH · Solution structure of the 2'-5' RNA ligase-like protein from Pyrococcus furiosus · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 2FYH · Solution structure of the 2'-5' RNA ligase-like protein from pyrococcus furiosus · an experimental structure of the same protein · chain A against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8U4Q3
- Elsewhere: UniProt Q8U4Q3 · AlphaFold DB Q8U4Q3
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