Research workbench
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q5H4C0)
Analyse AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q5H4C0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5H4C0
- Type
- protein
- Length
- 625 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0DC839D07bBC2D4EB1d6fD9d3D00815fD794FED2
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- Q5H4C0
- Pockets
- 5 · best druggability 0.74
Structure
1 distinct chain · 46% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 625 | 46% helix, 10% strand | Q5H4C0 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 325 | 0.74 | 0.86 | 61 | empty |
| 2 | 394 | 0.72 | 0.83 | 46 | empty |
| 3 | 106 | 0.54 | 0.84 | 22 | empty |
| 4 | 91 | 0.41 | 0.78 | 24 | empty |
| 5 | 142 | 0.39 | 0.73 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5H4C0
- Elsewhere: UniProt Q5H4C0 · AlphaFold DB Q5H4C0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.