Research workbench
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (A5CX15)
Analyse AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (A5CX15) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5CX15
- Type
- protein
- Length
- 622 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5DC8e905727f28f8E14d8601Ab9daaa77d7eaB40
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- A5CX15
- Pockets
- 7 · best druggability 0.75
Structure
1 distinct chain · 46% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 622 | 46% helix, 11% strand | A5CX15 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 383 | 0.75 | 0.85 | 61 | empty |
| 2 | 354 | 0.70 | 0.83 | 40 | empty |
| 3 | 82 | 0.63 | 0.90 | 27 | empty |
| 4 | 72 | 0.46 | 0.82 | 14 | empty |
| 5 | 116 | 0.39 | 0.74 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5CX15
- Elsewhere: UniProt A5CX15 · AlphaFold DB A5CX15
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