Research workbench
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q9X9U0)
Analyse AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q9X9U0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9X9U0
- Type
- protein
- Length
- 612 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Dc146208de75f433B0cA37588fA133d01B61494
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- Q9X9U0
- Pockets
- 5 · best druggability 0.73
Structure
1 distinct chain · 45% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 612 | 45% helix, 11% strand | Q9X9U0 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 411 | 0.73 | 0.84 | 54 | empty |
| 2 | 408 | 0.72 | 0.83 | 49 | empty |
| 3 | 348 | 0.65 | 0.80 | 48 | empty |
| 4 | 121 | 0.46 | 0.78 | 22 | empty |
| 5 | 132 | 0.39 | 0.73 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9X9U0
- Elsewhere: UniProt Q9X9U0 · AlphaFold DB Q9X9U0
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