Research workbench
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q028Z8)
Analyse AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q028Z8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q028Z8
- Type
- protein
- Length
- 461 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6C7844EE9CCb104C5dBBCcd588586c47744E0fFf
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- Q028Z8
- Pockets
- 2 · best druggability 0.72
Structure
1 distinct chain · 53% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 461 | 53% helix, 8% strand | Q028Z8 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 381 | 0.72 | 0.83 | 47 | empty |
| 2 | 221 | 0.50 | 0.76 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q028Z8
- Elsewhere: UniProt Q028Z8 · AlphaFold DB Q028Z8
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