Research workbench
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (B4T0Z6)
Analyse AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (B4T0Z6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4T0Z6
- Type
- protein
- Length
- 631 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- B4T0Z6
- Pockets
- 8 · best druggability 0.74
Structure
1 distinct chain · 46% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 631 | 46% helix, 12% strand | B4T0Z6 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 350 | 0.74 | 0.85 | 52 | empty |
| 2 | 510 | 0.73 | 0.82 | 56 | empty |
| 3 | 109 | 0.46 | 0.79 | 22 | empty |
| 4 | 119 | 0.44 | 0.77 | 26 | empty |
| 5 | 87 | 0.36 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4T0Z6
- Elsewhere: UniProt B4T0Z6 · AlphaFold DB B4T0Z6
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