Research workbench
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q133T3)
Analyse AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q133T3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q133T3
- Type
- protein
- Length
- 641 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbD6cf980ad8408d7f6AFc9af4F12d42b6F64d623
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- Q133T3
- Pockets
- 7 · best druggability 0.73
Structure
1 distinct chain · 46% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 641 | 46% helix, 10% strand | Q133T3 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 385 | 0.73 | 0.84 | 42 | empty |
| 2 | 301 | 0.72 | 0.85 | 48 | empty |
| 3 | 106 | 0.54 | 0.84 | 19 | empty |
| 4 | 126 | 0.51 | 0.80 | 27 | empty |
| 5 | 185 | 0.50 | 0.77 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q133T3
- Elsewhere: UniProt Q133T3 · AlphaFold DB Q133T3
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