Research workbench
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q48P32)
Analyse AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q48P32) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q48P32
- Type
- protein
- Length
- 629 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- Q48P32
- Pockets
- 7 · best druggability 0.78
Structure
1 distinct chain · 44% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 629 | 44% helix, 11% strand | Q48P32 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 267 | 0.78 | 0.90 | 46 | empty |
| 2 | 446 | 0.72 | 0.82 | 49 | empty |
| 3 | 73 | 0.68 | 0.94 | 26 | empty |
| 4 | 110 | 0.49 | 0.80 | 24 | empty |
| 5 | 63 | 0.35 | 0.78 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q48P32
- Elsewhere: UniProt Q48P32 · AlphaFold DB Q48P32
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