Research workbench
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (A4G224)
Analyse AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (A4G224) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4G224
- Type
- protein
- Length
- 637 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x774582E07a40A87E4c6afEFD04C85A974BBd781F
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- A4G224
- Pockets
- 8 · best druggability 0.81
Structure
1 distinct chain · 47% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 637 | 47% helix, 10% strand | A4G224 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 178 | 0.81 | 0.96 | 32 | empty |
| 2 | 404 | 0.72 | 0.83 | 48 | empty |
| 3 | 163 | 0.67 | 0.87 | 24 | empty |
| 4 | 129 | 0.52 | 0.80 | 21 | empty |
| 5 | 174 | 0.44 | 0.74 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4G224
- Elsewhere: UniProt A4G224 · AlphaFold DB A4G224
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