Research workbench
AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q8RI60)
Analyse AlphaFold monomer V2.0 prediction for phosphomethylpyrimidine synthase (Q8RI60) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8RI60
- Type
- protein
- Length
- 433 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Phosphomethylpyrimidine synthase
- UniProt
- Q8RI60
- Pockets
- 3 · best druggability 0.73
Structure
1 distinct chain · 52% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphomethylpyrimidine synthase | protein | 433 | 52% helix, 9% strand | Q8RI60 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 408 | 0.73 | 0.83 | 50 | empty |
| 2 | 303 | 0.57 | 0.76 | 27 | empty |
| 3 | 304 | 0.52 | 0.74 | 42 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8RI60
- Elsewhere: UniProt Q8RI60 · AlphaFold DB Q8RI60
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