Research workbench
AlphaFold monomer V2.0 prediction for thermitase (P04072)
Analyse AlphaFold monomer V2.0 prediction for thermitase (P04072) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P04072
- Type
- protein
- Length
- 279 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7A8d0de136F476946697d10c096A32feA3C2aFd7
- Molecule
- Thermitase
- UniProt
- P04072
- Pockets
- 1 · best druggability 0.29
Structure
1 distinct chain · 28% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thermitase | protein | 279 | 28% helix, 20% strand | P04072 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 65 | 0.29 | 0.74 | 22 | empty |
Compared structures
- 1THM · Crystal structure of thermitase at 1.4 ångströms resolution · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1THM · Crystal structure of thermitase at 1.4 ångströms resolution · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 2TEC · Molecular dynamics refinement of a thermitase-eglin-C complex at 1.98 ångströms… · an experimental structure of the same protein · chain A against E, TM-score 1.00
- 2TEC · Molecular dynamics refinement of a thermitase-eglin-C complex at 1.98 ångströms… · an experimental structure of the same protein · chain A against E, TM-score 1.00
- 3TEC · Calcium binding to thermitase. crystallographic studies of thermitase at 0, 5 and 100 mm… · an experimental structure of the same protein · chain A against E, TM-score 1.00
- 3TEC · Calcium binding to thermitase. crystallographic studies of thermitase at 0, 5 and 100 mm… · an experimental structure of the same protein · chain A against E, TM-score 1.00
- 1TEC · Crystallographic refinement by incorporation of molecular dynamics. the thermostable… · an experimental structure of the same protein · chain A against E, TM-score 1.00
- 1TEC · Crystallographic refinement by incorporation of molecular dynamics. the thermostable… · an experimental structure of the same protein · chain A against E, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04072
- Elsewhere: UniProt P04072 · AlphaFold DB P04072
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