Research workbench
AlphaFold monomer V2.0 prediction for thermolysin (Q43880)
Analyse AlphaFold monomer V2.0 prediction for thermolysin (Q43880) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q43880
- Type
- protein
- Length
- 546 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- Thermolysin
- UniProt
- Q43880
- Pockets
- 4 · best druggability 0.63
Structure
1 distinct chain · 31% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thermolysin | protein | 546 | 31% helix, 27% strand | Q43880 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 347 | 0.63 | 0.79 | 43 | empty |
| 2 | 301 | 0.63 | 0.80 | 25 | empty |
| 3 | 202 | 0.54 | 0.78 | 33 | empty |
| 4 | 161 | 0.47 | 0.76 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q43880
- Elsewhere: UniProt Q43880 · AlphaFold DB Q43880
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