Research workbench
AlphaFold monomer V2.0 prediction for transforming growth factor beta-1 proprotein (Q38HS2)
Analyse AlphaFold monomer V2.0 prediction for transforming growth factor beta-1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q38HS2
- Type
- protein
- Length
- 390 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c7eF5512E51Bcd3d8e1379AFF339AD78CFbD034
- Molecule
- Transforming growth factor beta-1 proprotein
- UniProt
- Q38HS2
- Pockets
- 5 · best druggability 0.66
Structure
1 distinct chain · 26% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transforming growth factor beta-1 proprotein | protein | 390 | 26% helix, 29% strand | Q38HS2 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 592 | 0.66 | 0.76 | 59 | empty |
| 2 | 159 | 0.45 | 0.75 | 18 | empty |
| 3 | 73 | 0.37 | 0.78 | 17 | empty |
| 4 | 67 | 0.32 | 0.75 | 12 | empty |
| 5 | 76 | 0.30 | 0.73 | 18 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q38HS2
- Elsewhere: UniProt Q38HS2 · AlphaFold DB Q38HS2
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