Research workbench
AlphaFold monomer V2.0 prediction for transcription factor TGA3 (Q39234)
Analyse AlphaFold monomer V2.0 prediction for transcription factor TGA3 (Q39234) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q39234
- Type
- protein
- Length
- 384 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa7895d4C013f5DC92500149D1BFf12D23755C20
- Molecule
- Transcription factor TGA3
- UniProt
- Q39234
- Pockets
- 3 · best druggability 0.72
Structure
1 distinct chain · 63% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription factor TGA3 | protein | 384 | 63% helix, 1% strand | Q39234 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.72 | 0.98 | 19 | empty |
| 2 | 182 | 0.43 | 0.73 | 22 | empty |
| 3 | 101 | 0.32 | 0.72 | 15 | empty |
Compared structures
- 7TAD · Cryoem structure of the (NPR1)2-(TGA3)2 complex · an experimental structure of the same protein · chain A against C, TM-score 0.53
- 7TAD · CryoEM structure of the (NPR1)2-(TGA3)2 complex · an experimental structure of the same protein · chain A against C, TM-score 0.53
- 7TAC · Cryo-EM structure of the (TGA3)2-(NPR1)2-(TGA3)2 complex · an experimental structure of the same protein · chain A against C, TM-score 0.53
- 7TAC · Cryo-EM structure of the (TGA3)2-(NPR1)2-(TGA3)2 complex · an experimental structure of the same protein · chain A against C, TM-score 0.53
- 7TAE · Crystal Structure of the NPR1-Interacting Domain of TGA3 · an experimental structure of the same protein · chain A against A, TM-score 0.52
- 7TAE · Crystal structure of the NPR1-interacting domain of TGA3 · an experimental structure of the same protein · chain A against A, TM-score 0.52
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q39234
- Elsewhere: UniProt Q39234 · AlphaFold DB Q39234
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.